Overview

Concepts

Classes

Specializations

Shortcuts

Functions

Metafunctions

Tags

Adaptions

Examples

Basics

Graph

Breadth-First Search

Depth-First Search

Strongly Connected Components

Topological Sort

Needleman-Wunsch Algorithm

Gotohs Algorithm

Hirschbergs Algorithm

Smith-Waterman Algorithm

All Pairs Shortest Path

Floyd-Warshall Algorithm

Heuristic Matching

Maximum Flow

Kruskals Algorithm

Prims Algorithm

MSA with Neighbor-Joining

MSA with UPGMA

T-Coffee

Longest Increasing Subsequence

Heaviest Increasing Subsequence

Longest Common Subsequence

Bellman-Ford Algorithm

Shortest Path in DAGs

Dijkstras Algorithm

Transitive Closure

Index

Modifier

Motif Search

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System

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