Holds a collection of objects of a specific type, where each object represents the frequency (absolute or relative probability) of a particular residue which is a member of a fixed sequence alphabet.
The type of sequence which is considered.
The type of probability distribution.
Remarks: It is preferable to use
|Type of iterator objects that are used to traverse the container.|
|Type of an object that represents a position in a container.|
|Type of an object that is suitable to hold size information.|
|The spec of a class.|
|Type of the items in the container.|
|Counts the number of times each residue of a fixed sequence alphabet occurs in a given sequence.|
|Counts the number of times each residue of a fixed sequence alphabet occurs in a given set of sequences.|
|Adds a value of a specific type to each element of a given FrequencyDistribution object.|
|Determines the background letter frequencies in a given dataset|
|The begin of a container.|
|Resets an object.|
|Concatenates the background frequency with the profile for the motif component.|
|Coverts a residue to a frequency distribution (profile).|
|The end of a container.|
|The number of items/characters.|
|Logarithmizes each element of a given FrequencyDistribution object.|
|Determines the normalized frequencies.|
|Determines the residue position in a given FrequencyDistribution object with the maximum frequency.|
|Determines the sum of all frequencies in a given FrequencyDistribution object.|
The number of objects in FrequencyDistribution equals the size of the sequence alphabet.
SeqAn - Sequence Analysis Library - www.seqan.de