Function
globalChaining
Calculates the best global chain using the Gusfield-Algorithm with scores (ManhattanDistance) and without.
Parameters
The set of seeds to chain. Types: Scored SeedSet | |
Container in which the result should be stored. The chain is in reversed order. | |
Gap cost value. | |
Length of the first sequence. | |
Length of the second sequence. |
Return Values
The score of the chain.
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