Function
multiLocalAlignment
Computes multiple local alignments of two sequences.
multiLocalAlignment(graph, edgeMap, score, numAlign, tag)
Parameters
graph
The alignment graph having 2 sequences.
edgeMap
An edge map of pairs of integers. The first number is the id of the local alignment, the second one the score of the local alignment.
score
The score values to be used for computing the alignment.
Types: Score
numAlign
The desired number of local alignments to compute.
tag
A tag indicating the alignment algorithm to use
Remarks: SmithWatermanIsland or SmithWatermanClump
Return Values
void
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