Class Specialization
BFAM
Backward Factor Automaton Matching algorithm.
Pattern<TNeedle, BFAM<TAutomaton> >
Parameters
TNeedle
The needle type.
Types: String
TAutomaton
A tag that specifies the used automaton.
Default: BFAM<Oracle>
Specialization of
Metafunctions
NeedleReturns the needle type of a Pattern type. (Pattern)
ScoringSchemeReturns the scoring scheme of an approximate searching algorithm. (Pattern)
Functions
findSearch for a Pattern in a Finder object. (Pattern)
findBeginSearch the begin of an approximate match. (Pattern)
hostThe object a given object depends on. (Pattern)
needleReturns the needle of a Pattern object (not implemented for some online-algorithms). (Pattern)
positionPosition of an iterator. (Pattern)
scoringSchemeThe scoring scheme used for finding or aligning. (Pattern)
setNeedleSets the needle of a Pattern object and optionally induces preprocessing. (Pattern)
setScoringSchemeSets the scoring scheme used for finding or aligning. (Pattern)
Remarks
To be used in combination with the default specialization of Finder.
See Also
SeqAn - Sequence Analysis Library - www.seqan.de