Class
AlignCols
Pseudo columns container for row-based alignment classes.
AlignCols<TAlign>
Include Headers
seqan/align.h
Parameters
TAlign
Alignment type.
Metafunctions: Host
Remarks
This class emulates a container of columns on alignment classes that store the alignment in a container of rows. Note that accessing a row-based alignment column-wise can be significantly slower than accessing the alignment row-wise.
Metafunctions
HostType of the object a given object depends on.
IteratorType of iterator objects that are used to traverse the container.
PositionType of an object that represents a position in a container.
SizeType of an object that is suitable to hold size information.
ValueType of the items in the container.
Functions
beginThe begin of a container.
beginPositionBegin position of object in host.
endThe end of a container.
endPositionEnd position of object in host.
hostThe object a given object depends on.
iterIterator to item at given position.
valueReference to the value.
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