Function
appendMatePair
Appends two paired-end reads to a fragment store.
Include Headers
seqan/store.h
Parameters
The fragment store. Types: FragmentStore | |
The read sequence of the first read. | |
The read sequence of the second read. | |
The read name of the first read. | |
The read name of the second read. |
Remarks
This function appends two reads to the readStore and readSeqStore
and a mate-pair entry between both of them to the matePairStore.
If names are given, they are appended to the readNameStore.
Return Values
The matePairId of the newly appended mate-pair.
See Also
SeqAn - Sequence Analysis Library - www.seqan.de