Function
appendMatePair
Appends two paired-end reads to a fragment store.
appendMatePair(store, readId1, readId2)
appendMatePair(store, readId1, readId2, name1, name2)
Include Headers
seqan/store.h
Parameters
store
The fragment store.
readId1
The read sequence of the first read.
readId2
The read sequence of the second read.
name1
The read name of the first read.
name2
The read name of the second read.
Remarks
This function appends two reads to the readStore and readSeqStore and a mate-pair entry between both of them to the matePairStore. If names are given, they are appended to the readNameStore.
Return Values
The matePairId of the newly appended mate-pair.
See Also
SeqAn - Sequence Analysis Library - www.seqan.de
 

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