countOccurrencesMultiple

Function

Returns the number of occurences of a q-gram for every sequence of a StringSet .

countOccurrencesMultiple(index, shape)

Include Headers

seqan/index.h

Parameters

index	A q-gram index of a StringSet. Types: IndexQGram
shape	A shape object. Note: The shape stores the q-gram of the last call to hash or hashNext. Types: Shape

Remarks

The necessary index tables are built on-demand via indexRequire if index is not const.

Return Values

A sequence of pairs (seqNo,count), count>0. For every StringSet sequence the q-gram occurs in, seqNo is the sequence number and count the number of occurrences. If the type of index is TIndex the return type is Infix<Fibre<TIndex, QGramCounts>::Type const>::Type.