Function
extendSeedScore
Extends a seed and increases the score.
Include Headers
seqan/seeds.h
Parameters
The seed to extend. Types: Seed | |
A reference to the score of the seed. This will be increased by the score of the extension. | |
The query sequence. The database sequence. | |
Defines the direction in which the seed should be extended. 0 = left, 1 = right, 2 = both | |
The score drop after which the extension should stop. The extension stops if this value is exceeded. | |
The scoring scheme. Types: Simple Score | |
The algorithm to use. |
See Also
SeqAn - Sequence Analysis Library - www.seqan.de