Computes multiple local alignments of two sequences.
multiLocalAlignment(strSet, alignments, scores, scType, minScore, diagLow, diagHigh, tag)
A string set of 2 sequences.
The set of all local alignment matches.
The respective local alignment score that match was coming from.
A scoring object.
The minimal score of a local alignment.
The upmost diagonal that will be computed for banded alignment.
The desired number of local alignments to compute.
A tag indicating the alignment algorithm to use
SeqAn - Sequence Analysis Library - www.seqan.de