Function
multiLocalAlignment
Computes multiple local alignments of two sequences.
multiLocalAlignment(strSet, alignments, scores, scType, minScore, diagLow, diagHigh, tag)
Include Headers
seqan/graph_align.h
Parameters
A string set of 2 sequences. Types: StringSet | |
The set of all local alignment matches. | |
The respective local alignment score that match was coming from. | |
A scoring object. | |
The minimal score of a local alignment. | |
The upmost diagonal that will be computed for banded alignment. Types: Score | |
The desired number of local alignments to compute. | |
A tag indicating the alignment algorithm to use Remarks: |
Return Values
void
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