Function
windowFindNext
Searches over the next window with the finder. The found hits can be retrieved with getSwiftHits Used together with windowFindBegin and windowFindEnd.
windowFindNext(finder, pattern, finderWindowLength)
Include Headers
seqan/index.h
Parameters
finder
A SWIFT finder.
pattern
A SWIFT pattern.
finderWindowLength
Number of bases that are scanned beginning from the position the finder is at. Including bases that are marked as repeats and that are skipped.
Types: unsigned int
Return Values
true, if there are bases that can be scanned. false, otherwise
SeqAn - Sequence Analysis Library - www.seqan.de
 

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