Shortcut
CharString
A string of char .
Shortcut for
Functions
Return a CommandLineOption object extended by an argument text. | |
Adds an extra line of text below the help text of an option. | |
Adds a line of text to the help output of the CommandLineParser. | |
Adds a new section the help output of the CommandLineParser. | |
Adds a line of text to the title output of the CommandLineParser. | |
Adds a line of text to the usage output of the CommandLineParser. | |
Adds a line of text to the version output of the CommandLineParser. | |
Appends a name to a name store. | |
Appends a read to a fragment store. | |
Returns the argument text of a CommandLineOption object. | |
Extracts the sequence id up to the first whitespace of a sequence file fragment. | |
Extracts the quality values of a sequence file fragment. | |
Extracts the quality value id of a sequence file fragment. | |
Extracts the sequence id of a sequence file fragment. | |
Reference to the name (identifier) of the database in a Blast report. | |
Returns an argument set on the command line. | |
The name (identifier) of the database in a Blast report. | |
Appends a name to a name store. | |
The name (identifier) of the query in a Blast report. | |
Loads contigs into fragment store. | |
Loads reads into fragment store. | |
Reference to the name (identifier) of the query in a Blast report. | |
Sets the help text associated with the CommandLineOption object. | |
Sets the long-name of a CommandLineOption object. |
See Also
SeqAn - Sequence Analysis Library - www.seqan.de