Iter

Class

Iter

Iterator that is used to traverse containers.

Iter<TContainer, TSpec>

Include Headers

seqan/basic.h

Parameters

TContainer	Type of the container that can be iterated by Iter. Metafunctions: Container
TSpec	The specializing type. Metafunctions: Spec

Implements

IteratorAssociatedTypesConcept

Specializations

Adaptor Iterator	Adapts iterators to RootedIteratorConcept.
Adjacency Iterator	Adjacency iterator for Graph.
AlignColIterator	Iterator for AlignCols pseudo container.
AnnotationTree Iterator	Iterator of the annotation tree represented by a FragmentStore.
Bfs Iterator	Breath-first search iterator for Graph.
ConcatVirtual Iterator	Iterator that sequentially iterates through the elements of a StringSet as if they were directly concatenated, cmp. ConcatDirect.
Dfs Preorder Iterator	Depth-first search iterator for Graph.
Edge Iterator	Edge iterator for Graph.
Out-Edge Iterator	Out-edge iterator for Graph.
Position Iterator	Adapts Position Iterator to Rooted Iterator.
RightArrayBinaryTree Iterator	An iterator for RightArrayBinaryTree.
STD Adaptor Iterator	Adapt STL iterators to SeqAn iterators.
Vertex Iterator	Vertex iterator for Graph.
VSTree Iterator	Abstract iterator for suffix trees.

Metafunctions

Container	Type of the container given an iterator.
Difference	Type of an object that stores the difference between two iterators.
GetValue	Type for reading values.
Iterator	Type of iterator objects that are used to traverse the container.
Position	Type of an object that represents a position in a container.
Reference	Reference type.
Spec	The spec of a class.
Value	Type of the items in the container or behind an iterator.

Functions

assignValue	Assigns value to item.
atBegin	Determines whether an iterator is at the beginning position.
atEnd	Determines whether an iterator is at the end position.
atEndOfSequence	Returns true if the iterator is at the end of a sequence.
container	Container of an iterator.
difference	The difference between two iterators.
getValue	Access to the value.
goBegin	Iterates to the first position of a container.
goEnd	Iterates to the last position of a container.
goFurther	Iterates some steps further.
goNext	Iterates to next position.
goPrevious	Iterates to pevious position.
moveValue	Assigns value to item.
position	Position of an iterator.
value	Reference to the value.

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