Function
getKmerSimilarityMatrix
Creates a matrix storing the number of common q-grams between all pairs of sequences.
Include Headers
seqan/index.h
Parameters
A q-gram index. Types: IndexQGram | |
The resulting q-gram similarity matrix. Types: ContainerConcept | |
Contains sequence numbers if only a subset of sequences should be compared. Types: ContainerConcept |
Remarks
Member of
Example Programs
SeqAn - Sequence Analysis Library - www.seqan.de