Function
sumOfPairsScore
Given a multiple alignment, this function calculates the sum-of-pairs score.
Include Headers
seqan/graph_msa.h
Parameters
An alignment graph. Types: Alignment Graph | |
A score object. Types: Score |
Remarks
This function does NOT assume independent columns.
That is, gap openings are properly scored.
If you want the fast version assuming independ columns use sumOfPairsScoreInd.
Return Values
void
Member of
SeqAn - Sequence Analysis Library - www.seqan.de