Function
windowFindNext
Searches over the next window with the finder. The found hits can be retrieved with getWindowFindHits Used together with windowFindBegin and windowFindEnd.
windowFindNext(finder, pattern, finderWindowLength)
Include Headers
seqan/index.h
Parameters
finder
A finder with window interface.
Types: Pigeonhole
pattern
A pattern with window interface.
finderWindowLength
Number of bases that are scanned beginning from the position the finder is at. Including bases that are marked as repeats and that are skipped.
Types: unsigned int
Return Values
true, if there are bases that can be scanned. false, otherwise
Member of
SeqAn - Sequence Analysis Library - www.seqan.de
 

Page built @2013/07/11 09:12:18