Function
clippedEndPosition
Return the end position of the clipping in the unclipped gapped sequence.
Include Headers
seqan/align.h
Return Values
The end position of the current clipped view in the unclipped gapped sequence.
Types: Position
Member of
Examples
In the following gaps configuration, the result of clippedEndPosition(gaps) is 7 .
(half-open interval)
gapped sequence: X--XXX-XX-
source position: 0111234456
unclipped view position: 0123456789
clipped view position: 0123456
See Also
SeqAn - Sequence Analysis Library - www.seqan.de