Member Function
AFScore
Constructor
Parameters
Size of kmer Types: unsigned | |
Order of the background Markov model Types: unsigned | |
Scoring of reverse complements words [''/'max'/'min'/'mean'/'both_strands'/] Types: String<char> | |
Includes words with one mismatch into the word neighbourhood. [0/1] Types: unsigned | |
Weight of word counts with one mismatch Types: double | |
When specified, all normalised and standardised kmer neighbourhood counts will be written to this file for every sequence Types: String<char> Default: "" | |
This option will report progress to standard output. Types: bool Default: false |
Remarks
No remarks
Member of
See Also
SeqAn - Sequence Analysis Library - www.seqan.de