Metafunction
Position
Type of an object that represents a position in a container.
Position<T>::Type
Include Headers
seqan/basic.h
Parameters
T
Type for which the position type is determined.
Return Values
Type
Position type of T.
Functions
beginPositionReturn the clipping begin position as a source position.
clippedBeginPositionReturn the begin position of the clipping in the unclipped gapped sequence.
clippedEndPositionReturn the end position of the clipping in the unclipped gapped sequence.
endPositionReturn the clipping end position as a source position.
hostToVirtualPositionTranslates position in host to virtual (view) position.
infixCreates infix object.
infixWithLengthCreates infix object.
insertGapInsert one gap into a gapped sequence.
insertGapsInsert multiple gaps into a gapped sequence.
isGapQuery whether a given clipped view position is a gap.
prefixCreates prefix object.
removeGapRemove one gap from a gapped sequence.
removeGapsRemove multiple gaps from a gapped sequence.
setBeginPositionSets begin position of object in host.
setClippedBeginPositionSets the begin position of the clipping.
setClippedEndPositionSets the end position of the clipping.
setEndPositionSets begin position of object in host.
suffixCreates suffix object.
virtualToHostPositionTranslates virtual (view) position to position in host.
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