Metafunction
Size
Type of an object that is suitable to hold size information.
Size<T>::Type
Include Headers
seqan/basic.h
Remarks
In most cases this type is size_t.
Return Values
Type
Size type of T.
Functions
addEdgesShortcut to add multiple edges at once. Creates vertices implicitly.
countGapsReports number of continues gaps right of current iterator position.
emptyParentEdgeReturns true iff the edge label from the iterator node to its parent is empty.
getProjectedPositionProjects a position of one sequence taking part in a pairwise match onto the other sequence.
lengthReturns the number of different characters in the prefix-sum table.
nodeDepthReturns the zero-based node depth of the iterator node.
parentRepLengthReturns the length of the substring representing the path from root to iterator's parent node.
removeGapRemove one gap from a gapped sequence.
removeGapsRemove multiple gaps from a gapped sequence.
repLengthReturns the length of the substring representing the path from root to iterator node.
unclippedLengthReturn length of the gapped sequence without clipping.
Part of Concept
See Also
SeqAn - Sequence Analysis Library - www.seqan.de
 

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