Enum
TokenizeResult
Enum with return values for Tokenizing operations.
Include Headers
seqan/stream.h
Functions
countLinecount characters in a line not including \r and \n
readAlphaNumsRead characters from stream as long as characters are letters
readDigitsRead characters from stream as long as characters are digits
readDna5IgnoringWhitespacesRead characters from stream, as long as they are DNA5 characters. Skip over whitespaces.
readFloatRead characters from stream as long as the number is a valid floating point numbers.
readGraphsRead characters from stream as long as characters are graph characters.
readIdentifierRead characters from stream as long as characters are identifiers (alphanumeric, '-', and '_').
readLettersRead characters from stream as long as characters are letters
readLineRead a line from stream and save it to buffer
readLineStripTrailingBlanksRead a line from stream and save it to buffer, remove trailing blanks
readNCharsRead exactly n characters from stream into buffer
readNCharsIgnoringWhitespaceRead n characters from stream into buffer, but skip certain Chars
readUntilBlankRead characters from stream into buffer until Blank is encountered
readUntilCharRead characters from stream into buffer until Char is encountered
readUntilOneOfRead characters from stream into buffer until one of the given characters is encountered
readUntilTabOrLineBreakRead characters from stream until a tab or line-break occurs.
readUntilWhitespaceRead characters from stream into buffer until Whitespace is encountered
skipBlanksSkip (i.e. read without saving) characters from stream until non-Blank is encountered
skipCharSkip one character that must be equal to a given one for this function to succeed.
skipLineSkip a line in stream and go to beginning of next
skipNCharsSkip exactly n characters from stream
skipNCharsIgnoringWhitespaceSkip n characters from stream, not counting whitespaces
skipUntilBlankSkip (i.e. read without saving) characters from stream until Blank is encountered
skipUntilCharSkip (i.e. read without saving) characters from stream until Char is encountered
skipUntilGraphSkip (i.e. read without saving) characters from stream until printable, non-' ' character is encountered
skipUntilLineBeginsWithCharSkip input until the first graphical(see isgraph) character of a line is equal to c
skipUntilLineBeginsWithOneCharOfStrSkip input until a line begins with a one of the characters in str
skipUntilLineBeginsWithStrSkip input until a line begins with str.
skipUntilStringSkip (i.e. read without saving) characters from stream until String is encountered
skipUntilWhitespaceSkip (i.e. read without saving) characters from stream until Whitespace is encountered
skipWhitespacesSkip (i.e. read without saving) characters from stream until non-Whitespace is encountered
Values
SUCCESS
Reading the specified data succeeded.
1-1023
File Error passed through
EOF_BEFORE_SUCCESS
End of file was reached before the pattern was found.
NO_SUCCESS
The pattern was not found, but we are not at EOF (may be returned when tokenizing on limited scope)
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