Transforms view to source position, if the view position is a gap, the original position of the next non-gap entry is returned.
A Gaps object, e.g. a row in the alignment.
Position in the view sequence (this includes gaps) to get the original position for.
gap is a clipped alignment row, gaps in the clipped part will influence the result. The position pos is counted from the unclipped begin position.
The position in the source sequence.
SeqAn - Sequence Analysis Library - www.seqan.de