Function

zscore

Computes the z-score index for a set of patterns w.r.t. a set of text strings and a MarkovModel

Include Headers

seqan/statistics.h

Parameters

The set of patterns. Types: StringSet | |

The set of text strings. Types: StringSet | |

The MarkovModel object. Types: MarkovModel | |

The algorithm to exploit to compute the number of occurrences of patterns in the text strings (see AhoCorasick etc.). |

Remarks

If the alphabet is Dna, then the suitable correction factors are computed.

Return Values

The z-score for W w.r.t. X and M.

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SeqAn - Sequence Analysis Library - www.seqan.de