Function
beginPosition
Return the clipping begin position as a source position.
Include Headers
seqan/align.h
Return Values
The begin position of the current clipped view in the source.
Types: Position
Member of
Examples
In the following gaps configuration, the result of beginPosition(gaps) is 1 .
The clipping starts in a gap and the source position of the first non-gap character right of the clipping begin has source position 1 .
(half-open interval)
gapped sequence: X--XXX-XX-
source position: 0111234456
unclipped view position: 0123456789
clipped view position: 0123456
See Also
SeqAn - Sequence Analysis Library - www.seqan.de