Class VcfIOContext

The I/O context to use for VCF I/O.

/*!
 * @class VcfIOContext
 * 
 * @headerfile <seqan/vcf_io.h>
 * 
 * @brief The I/O context to use for VCF I/O.
 * 
 * @signature class VcfIOContext;
 * 
 * VcfIOContext objects store the names of (and provide a cache for) reference
 * and sample names. StringSet of CharString are used for the name stores.
 * 
 * @fn VcfIOContext::VcfIOContext
 * 
 * @brief Constructor.
 * 
 * @signature VcfIOContext::VcfIOContext();
 * @signature VcfIOContext::VcfIOContext(sequenceNames, sampleNames);
 * 
 * Default constructor or construction with references to sequence and sample
 * names.
 * 
 * @var TNamesPtr VcfIOContext::sequenceNames;
 * 
 * @brief Names of the reference sequences, pointer to @link StringSet @endlink
 *        of @link CharString @endlink.
 * 
 * @var TNameStoreCache VcfIOContext::sequenceNamesCache;
 * 
 * @brief Name store cache for of the reference names, @link NameStoreCache
 *        @endlink of @link CharString @endlink.
 * 
 * @var TNamesPtr VcfIOContext::sampleNames;
 * 
 * @brief Names of the samples, pointer to @link StringSet @endlink of @link
 *        CharString @endlink.
 * 
 * @var TNameStoreCache VcfIOContext::sampleNamesCache;
 * 
 * @brief Name store cache for the sample names, @link NameStoreCache @endlink
 *        of @link CharString @endlink.
 */