Typedef Blosum80
BLOSUM80 scoring matrix.

Defined in <seqan/score.h>
Signature typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecBlosum80> > Blosum80;

Overview

A      7
R     -3   9
N     -3  -1   9
D     -3  -3   2  10
C     -1  -6  -5  -7  13
Q     -2   1   0  -1  -5   9
E     -2  -1  -1   2  -7   3   8
G      0  -4  -1  -3  -6  -4  -4   9
H     -3   0   1  -2  -7   1   0  -4  12
I     -3  -5  -6  -7  -2  -5  -6  -7  -6   7
L     -3  -4  -6  -7  -3  -4  -6  -7  -5   2   6
K     -1   3   0  -2  -6   2   1  -3  -1  -5  -4   8
M     -2  -3  -4  -6  -3  -1  -4  -5  -4   2   3  -3   9
F     -4  -5  -6  -6  -4  -5  -6  -6  -2  -1   0  -5   0  10
P     -1  -3  -4  -3  -6  -3  -2  -5  -4  -5  -5  -2  -4  -6  12
S      2  -2   1  -1  -2  -1  -1  -1  -2  -4  -4  -1  -3  -4  -2   7
T      0  -2   0  -2  -2  -1  -2  -3  -3  -2  -3  -1  -1  -4  -3   2   8
W     -5  -5  -7  -8  -5  -4  -6  -6  -4  -5  -4  -6  -3   0  -7  -6  -5  16
Y     -4  -4  -4  -6  -5  -3  -5  -6   3  -3  -2  -4  -3   4  -6  -3  -3   3  11
V     -1  -4  -5  -6  -2  -4  -4  -6  -5   4   1  -4   1  -2  -4  -3   0  -5  -3   7
B     -3  -2   5   6  -6  -1   1  -2  -1  -6  -7  -1  -5  -6  -4   0  -1  -8  -5  -6   6
Z     -2   0  -1   1  -7   5   6  -4   0  -6  -5   1  -3  -6  -2  -1  -2  -5  -4  -4   0   6
X     -1  -2  -2  -3  -4  -2  -2  -3  -2  -2  -2  -2  -2  -3  -3  -1  -1  -5  -3  -2  -3  -1  -2
*     -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8  -8   1

+      A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V   B   Z   X   *