Typedef Pam120
PAM120 scoring matrix.

Defined in <seqan/score.h>
Signature typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecPam120> > Pam120;

Overview

A      3
R     -3    6
N     -1   -1    4
D      0   -3    2    5
C     -3   -4   -5   -7    9
Q     -1    1    0    1   -7    6
E      0   -3    1    3   -7    2    5
G      1   -4    0    0   -4   -3   -1    5
H     -3    1    2    0   -4    3   -1   -4    7
I     -1   -2   -2   -3   -3   -3   -3   -4   -4    6
L     -3   -4   -4   -5   -7   -2   -4   -5   -3    1    5
K     -2    2    1   -1   -7    0   -1   -3   -2   -3   -4    5
M     -2   -1   -3   -4   -6   -1   -3   -4   -4    1    3    0    8
F     -4   -5   -4   -7   -6   -6   -7   -5   -3    0    0   -7   -1    8
P      1   -1   -2   -3   -4    0   -2   -2   -1   -3   -3   -2   -3   -5    6
S      1   -1    1    0    0   -2   -1    1   -2   -2   -4   -1   -2   -3    1    3
T      1   -2    0   -1   -3   -2   -2   -1   -3    0   -3   -1   -1   -4   -1    2    4
W     -7    1   -4   -8   -8   -6   -8   -8   -3   -6   -3   -5   -6   -1   -7   -2   -6   12
Y     -4   -5   -2   -5   -1   -5   -5   -6   -1   -2   -2   -5   -4    4   -6   -3   -3   -2    8
V      0   -3   -3   -3   -3   -3   -3   -2   -3    3    1   -4    1   -3   -2   -2    0   -8   -3    5
B      0   -2    3    4   -6    0    3    0    1   -3   -4    0   -4   -5   -2    0    0   -6   -3   -3    4
Z     -1   -1    0    3   -7    4    4   -2    1   -3   -3   -1   -2   -6   -1   -1   -2   -7   -5   -3    2    4
X     -1   -2   -1   -2   -4   -1   -1   -2   -2   -1   -2   -2   -2   -3   -2   -1   -1   -5   -3   -1   -1   -1   -2
*     -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8    1

+      A    R    N    D    C    Q    E    G    H    I    L    K    M    F    P    S    T    W    Y    V    B    Z    X    *