Typedef Pam250
PAM250 scoring matrix.

Defined in <seqan/score.h>
Signature typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecPam250> > Pam250;

Overview

A      2
R     -2    6
N      0    0    2
D      0   -1    2    4
C     -2   -4   -4   -5   12
Q      0    1    1    2   -5    4
E      0   -1    1    3   -5    2    4
G      1   -3    0    1   -3   -1    0    5
H     -1    2    2    1   -3    3    1   -2    6
I     -1   -2   -2   -2   -2   -2   -2   -3   -2    5
L     -2   -3   -3   -4   -6   -2   -3   -4   -2    2    6
K     -1    3    1    0   -5    1    0   -2    0   -2   -3    5
M     -1    0   -2   -3   -5   -1   -2   -3   -2    2    4    0    6
F     -3   -4   -3   -6   -4   -5   -5   -5   -2    1    2   -5    0    9
P      1    0    0   -1   -3    0   -1    0    0   -2   -3   -1   -2   -5    6
S      1    0    1    0    0   -1    0    1   -1   -1   -3    0   -2   -3    1    2
T      1   -1    0    0   -2   -1    0    0   -1    0   -2    0   -1   -3    0    1    3
W     -6    2   -4   -7   -8   -5   -7   -7   -3   -5   -2   -3   -4    0   -6   -2   -5   17
Y     -3   -4   -2   -4    0   -4   -4   -5    0   -1   -1   -4   -2    7   -5   -3   -3    0   10
V      0   -2   -2   -2   -2   -2   -2   -1   -2    4    2   -2    2   -1   -1   -1    0   -6   -2    4
B      0   -1    2    3   -4    1    3    0    1   -2   -3    1   -2   -4   -1    0    0   -5   -3   -2    3
Z      0    0    1    3   -5    3    3    0    2   -2   -3    0   -2   -5    0    0   -1   -6   -4   -2    2    3
X      0   -1    0   -1   -3   -1   -1   -1   -1   -1   -1   -1   -1   -2   -1    0    0   -4   -2   -1   -1   -1   -1
*     -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8   -8    1

+      A    R    N    D    C    Q    E    G    H    I    L    K    M    F    P    S    T    W    Y    V    B    Z    X    *