Class
ContigFileRepresents a file containing contigs.
Represents a file containing contigs.
Defined in | <seqan/store.h> |
---|---|
Signature |
template <[typename TSpec]>
class ContigFile;
|
Template Parameters
TSpec |
The specializing type. Default: void. |
---|
Member Variable Overview
-
CharString ContigFile::fileName
Contig file name. -
TId ContigFile::firstContigId
The contigId of the first sequence in the file. Subsequent contig sequences have an increasing contigId. -
AutoSeqFormat ContigFile::format
Stores the contig file format, auto-detect in loadContigs.
Detailed Description
Value type of contigFileStore string.
Member Variables Detail
CharString ContigFile::fileName
Contig file name.
TId ContigFile::firstContigId
The contigId of the first sequence in the file. Subsequent contig sequences have an increasing contigId.
AutoSeqFormat ContigFile::format
Stores the contig file format, auto-detect in loadContigs.