Enum GeneticCode SpecsSpecialization values for GeneticCode
Specialization values for GeneticCode
Defined in | <seqan/translation.h> |
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Signature |
enum class GeneticCodeSpec : uint8_t { ...};
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Enum Values
CANONICAL = 1 |
The Standard Genetic Code
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VERT_MITOCHONDRIAL = 2 |
The Vertebrate Mitochondrial Code
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YEAST_MITOCHONDRIAL = 3 |
The Yeast Mitochondrial Code
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MOLD_MITOCHONDRIAL = 4 |
The Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code
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INVERT_MITOCHONDRIAL = 5 |
The Invertebrate Mitochondrial Code
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CILIATE = 6 |
The CILIATE, Dasycladacean and Hexamita Nuclear Code
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FLATWORM_MITOCHONDRIAL = 9 |
The Echinoderm and Flatworm Mitochondrial Code
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EUPLOTID = 10 |
The EUPLOTID Nuclear Code
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PROKARYOTE = 11 |
The Bacterial, Archaeal and Plant Plastid Code
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ALT_YEAST = 12 |
The Alternative Yeast Nuclear Code
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ASCIDIAN_MITOCHONDRIAL = 13 |
The Ascidian Mitochondrial Code
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ALT_FLATWORM_MITOCHONDRIAL = 14 |
The Alternative Flatworm Mitochondrial Code
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BLEPHARISMA = 15 |
BLEPHARISMA Nuclear Code
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CHLOROPHYCEAN_MITOCHONDRIAL = 16 |
Chlorophycean Mitochondrial Code
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TREMATODE_MITOCHONDRIAL = 21 |
Trematode Mitochondrial Code
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SCENEDESMUS_MITOCHONDRIAL = 22 |
Scenedesmus obliquus mitochondrial Code
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THRAUSTOCHYTRIUM_MITOCHONDRIAL = 23 |
Thraustochytrium Mitochondrial Code
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PTEROBRANCHIA_MITOCHONDRIAL = 24 |
Pterobranchia mitochondrial code
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GRACILIBACTERIA = 25 |
Candidate Division SR1 and GRACILIBACTERIA Code
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Detailed Description
The numeric values of the enums correspond to the genbank transl_table values (see http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi). Some genetic codes have been deprecated, so not all numeric values are available.
Please not that this is part of the translation module which requires C++11.