Typedef Pam120PAM120 scoring matrix.
PAM120 scoring matrix.
Defined in | <seqan/score.h> |
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Signature |
typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecPam120> > Pam120;
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Overview
A 3 B 0 4 C -3 -6 9 D 0 4 -7 5 E 0 3 -7 3 5 F -4 -5 -6 -7 -7 8 G 1 0 -4 0 -1 -5 5 H -3 1 -4 0 -1 -3 -4 7 I -1 -3 -3 -3 -3 0 -4 -4 6 J -2 -4 -5 -4 -4 0 -5 -4 4 4 K -2 0 -7 -1 -1 -7 -3 -2 -3 -4 5 L -3 -4 -7 -5 -4 0 -5 -3 1 3 -4 5 M -2 -4 -6 -4 -3 -1 -4 -4 1 2 0 3 8 N -1 3 -5 2 1 -4 0 2 -2 -3 1 -4 -3 4 O -1 -1 -4 -2 -1 -3 -2 -2 -1 -2 -2 -2 -2 -1 -1 P 1 -2 -4 -3 -2 -5 -2 -1 -3 -3 -2 -3 -3 -2 -2 6 Q -1 0 -7 1 2 -6 -3 3 -3 -3 0 -2 -1 0 -1 0 6 R -3 -2 -4 -3 -3 -5 -4 1 -2 -3 2 -4 -1 -1 -2 -1 1 6 S 1 0 0 0 -1 -3 1 -2 -2 -3 -1 -4 -2 1 -1 1 -2 -1 3 T 1 0 -3 -1 -2 -4 -1 -3 0 -2 -1 -3 -1 0 -1 -1 -2 -2 2 4 U -1 -1 -4 -2 -1 -3 -2 -2 -1 -2 -2 -2 -2 -1 -2 -2 -1 -2 -1 -1 -2 V 0 -3 -3 -3 -3 -3 -2 -3 3 2 -4 1 1 -3 -1 -2 -3 -3 -2 0 -1 5 W -7 -6 -8 -8 -8 -1 -8 -3 -6 -5 -5 -3 -6 -4 -5 -7 -6 1 -2 -6 -5 -8 12 Y -4 -3 -1 -5 -5 4 -6 -1 -2 -2 -5 -2 -4 -2 -3 -6 -5 -5 -3 -3 -3 -3 -2 8 Z -1 2 -7 3 4 -6 -2 1 -3 -3 -1 -3 -2 0 -1 -1 4 -1 -1 -2 -1 -3 -7 -5 4 X -1 -1 -4 -2 -1 -3 -2 -2 -1 -2 -2 -2 -2 -1 -2 -2 -1 -2 -1 -1 -2 -1 -5 -3 -1 -2 * -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 1 A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *