Spec SimpleIntervalsFileIn
FormattedFile for reading .intervals files.

Extends FormattedFileIn
All Extended FormattedFile, FormattedFileIn
Defined in <seqan/ucsc_io.h>
Signature typedef FormattedFile<SimpleIntervals, Input> SimpleIntervalsFileIn;

Member Function Overview

Member Functions Inherited From FormattedFile

Interface Function Overview

Interface Functions Inherited From FormattedFile

Interface Functions Inherited From FormattedFileIn

Interface Metafunction Overview

Interface Metafunctions Inherited From FormattedFile

Interface Functions Detail

void readRecord(record, file);

Reading records from a SimpleIntervalsFileIn.

Parameters

record The resulting GenomicRegion.
file The SimpleIntervalsFileIn to read from.

Thrown Exceptions

IOError in case of problems.

Data Races

Thread safety unknown!

void readRecord(record, file);

Writing records to a SimpleIntervalsFileIn.

Parameters

file The SimpleIntervalsFileIn to write to.
record The GenomicRegion to write out.

Thrown Exceptions

IOError in case of problems.

Data Races

Thread safety unknown!