Typedef Pam40PAM40 scoring matrix.
PAM40 scoring matrix.
Defined in | <seqan/score.h> |
---|---|
Signature |
typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecPam40> > Pam40;
|
Overview
A 6 B -3 6 C -6 -11 9 D -3 6 -12 7 E -2 2 -12 3 7 F -7 -9 -11 -13 -12 9 G -1 -2 -8 -3 -3 -8 6 H -6 -1 -7 -3 -4 -5 -8 9 I -4 -5 -5 -6 -5 -2 -9 -8 8 J -5 -7 -9 -9 -7 -2 -9 -7 4 4 K -6 -2 -12 -4 -4 -12 -6 -5 -5 -6 6 L -5 -8 -13 -11 -8 -2 -9 -5 -1 3 -7 7 M -4 -8 -12 -9 -6 -3 -7 -9 0 1 -1 1 11 N -3 6 -9 2 -1 -8 -2 1 -4 -5 0 -6 -7 7 O -3 -4 -8 -5 -4 -7 -4 -4 -4 -5 -4 -5 -4 -3 -4 P -1 -6 -7 -7 -5 -9 -5 -3 -7 -7 -6 -6 -7 -5 -4 8 Q -3 -2 -12 -2 2 -11 -6 1 -7 -6 -2 -4 -3 -3 -4 -2 8 R -6 -6 -7 -9 -8 -8 -8 -1 -5 -7 1 -8 -3 -5 -5 -3 -1 8 S 0 -1 -2 -3 -4 -6 -1 -5 -6 -7 -3 -7 -5 0 -2 -1 -4 -2 6 T 0 -2 -7 -4 -5 -8 -5 -6 -2 -4 -2 -6 -3 -1 -3 -3 -5 -5 1 7 U -3 -4 -8 -5 -4 -7 -4 -4 -4 -5 -4 -5 -4 -3 -4 -4 -4 -5 -2 -3 -4 V -2 -7 -5 -7 -6 -7 -5 -6 2 0 -8 -2 -1 -7 -4 -5 -6 -7 -5 -2 -4 7 W -12 -9 -14 -13 -15 -4 -13 -6 -12 -9 -10 -5 -11 -7 -9 -12 -11 -1 -4 -11 -9 -14 13 Y -7 -6 -3 -10 -8 2 -12 -3 -5 -6 -8 -6 -10 -4 -7 -12 -10 -9 -6 -6 -7 -6 -4 10 Z -2 1 -12 2 6 -12 -4 0 -5 -6 -3 -6 -4 -2 -4 -3 6 -3 -4 -5 -4 -6 -13 -8 6 X -3 -4 -8 -5 -4 -7 -4 -4 -4 -5 -4 -5 -4 -3 -4 -4 -4 -5 -2 -3 -4 -4 -9 -7 -4 -4 * -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 -15 1 A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *