Spec
FormattedFileInBase class for reading formatted files.
Base class for reading formatted files.
Extends | FormattedFile |
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All Extended | FormattedFile |
All Subcl's | BamFileIn, BedFileIn, BlastTabularFileIn, GffFileIn, RnaStructFileIn, RoiFileIn, SeqFileIn, SimpleIntervalsFileIn, UcscFileIn, VcfFileIn |
Defined in | <seqan/stream.h> |
Signature |
typedef FormattedFile<TFileFormat, Input, TSpec> FormattedFileIn;
|
Member Function Overview
Member Functions Inherited From FormattedFile
Interface Function Overview
-
void readHeader(fileIn, header);
Read one FormattedFileHeaderConcept from a FormattedFileIn object. -
void readRecord(fileIn, record);
Read one FormattedFileRecordConcept from a FormattedFileIn object.
Interface Functions Inherited From FormattedFile
Interface Metafunction Overview
Interface Metafunctions Inherited From FormattedFile
Detailed Description
Interface Functions Detail
void readHeader(fileIn, header);
Read one FormattedFileHeaderConcept from a FormattedFileIn object.
Parameters
fileIn
|
The FormattedFileIn object to read from. |
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header
|
The FormattedFileHeaderConcept to read. |
Thrown Exceptions
IOError |
On low-level I/O errors. |
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ParseError |
On high-level file format errors. |
Data Races
Thread safety unknown!
void readRecord(fileIn, record);
Read one FormattedFileRecordConcept from a FormattedFileIn object.
Parameters
fileIn
|
The FormattedFileIn object to read from. |
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record
|
The FormattedFileRecordConcept to read. |
Thrown Exceptions
IOError |
On low-level I/O errors. |
---|---|
ParseError |
On high-level file format errors. |
Data Races
Thread safety unknown!