Class
MatePairStoreElementRepresents a mate pair.
Represents a mate pair.
Defined in | |
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Signature |
template <[typename TSpec]>
struct MatePairStoreElement;
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Template Parameters
TSpec |
The specializing type. |
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Member Function Overview
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MatePairStoreElement::MatePairStoreElement();
Constructor.
Interface Metafunction Overview
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Id<TMatePairStoreElement>::Type;
Returns the id type to use for MatePairStoreElement.
Member Variable Overview
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TId MatePairStoreElement::INVALID_ID
Constant to represent an invalid id. -
TId MatePairStoreElement::libId
Refers to a library in the libraryStore or is INVALID_ID if the mate pair has no library. -
TId[2] MatePairStoreElement::readId
Refers to two paried reads in readStore or is INVALID_ID values.
Detailed Description
A mate pair consists of two reads sequences from opposite ends of the same fragment. The insert size of a mate pair is the inferred size of the fragment.
Member Functions Detail
MatePairStoreElement::MatePairStoreElement();
Constructor.
Initialize all member values to INVALID_ID.
Data Races
Thread safety unknown!
Member Variables Detail
TId MatePairStoreElement::INVALID_ID
Constant to represent an invalid id.
TId MatePairStoreElement::libId
Refers to a library in the libraryStore or is INVALID_ID if the mate pair
has no library.
TId[2] MatePairStoreElement::readId
Refers to two paried reads in readStore or is INVALID_ID values.