Typedef Pam250PAM250 scoring matrix.
PAM250 scoring matrix.
Defined in | <seqan/score.h> |
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Signature |
typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecPam250> > Pam250;
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Overview
A 2 B 0 3 C -2 -4 12 D 0 3 -5 4 E 0 3 -5 3 4 F -3 -4 -4 -6 -5 9 G 1 0 -3 1 0 -5 5 H -1 1 -3 1 1 -2 -2 6 I -1 -2 -2 -2 -2 1 -3 -2 5 J -2 -3 -4 -3 -3 2 -4 -2 4 4 K -1 1 -5 0 0 -5 -2 0 -2 -3 5 L -2 -3 -6 -4 -3 2 -4 -2 2 4 -3 6 M -1 -2 -5 -3 -2 0 -3 -2 2 3 0 4 6 N 0 2 -4 2 1 -3 0 2 -2 -3 1 -3 -2 2 O 0 -1 -3 -1 -1 -2 -1 -1 -1 -1 -1 -1 -1 0 -1 P 1 -1 -3 -1 -1 -5 0 0 -2 -3 -1 -3 -2 0 -1 6 Q 0 1 -5 2 2 -5 -1 3 -2 -2 1 -2 -1 1 -1 0 4 R -2 -1 -4 -1 -1 -4 -3 2 -2 -3 3 -3 0 0 -1 0 1 6 S 1 0 0 0 0 -3 1 -1 -1 -2 0 -3 -2 1 0 1 -1 0 2 T 1 0 -2 0 0 -3 0 -1 0 -1 0 -2 -1 0 0 0 -1 -1 1 3 U 0 -1 -3 -1 -1 -2 -1 -1 -1 -1 -1 -1 -1 0 -1 -1 -1 -1 0 0 -1 V 0 -2 -2 -2 -2 -1 -1 -2 4 3 -2 2 2 -2 -1 -1 -2 -2 -1 0 -1 4 W -6 -5 -8 -7 -7 0 -7 -3 -5 -4 -3 -2 -4 -4 -4 -6 -5 2 -2 -5 -4 -6 17 Y -3 -3 0 -4 -4 7 -5 0 -1 -1 -4 -1 -2 -2 -2 -5 -4 -4 -3 -3 -2 -2 0 10 Z 0 2 -5 3 3 -5 0 2 -2 -3 0 -3 -2 1 -1 0 3 0 0 -1 -1 -2 -6 -4 3 X 0 -1 -3 -1 -1 -2 -1 -1 -1 -1 -1 -1 -1 0 -1 -1 -1 -1 0 0 -1 -1 -4 -2 -1 -1 * -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 -8 1 A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *