Group Alignment Algorithm Tags
Tags for selecting algorithms.
Tags for selecting algorithms.
Grouped Tags Overview
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struct AffineGaps_;, typedef Tag<AffineGaps_> AffineGaps;
Tag for selecting affine gap cost model. This tag can be used for all standard DP algorithms. -
struct DynamicGaps_;, typedef Tag<DynamicGaps_> DynamicGaps;
Tag for selecting dynamic gap cost model. This tag can be used for all standard DP algorithms. -
struct Gotoh_;, typedef Tag<Gotoh_> Gotoh;
Tag for selecting Gotoh DP algorithm. -
struct Hirschberg_;, typedef Tag<Hirschberg_> Hirschberg;
Tag for selecting Hirschberg's DP algorithm. -
struct LinearGaps_;, typedef Tag<LinearGaps_> LinearGaps;
Tag for selecting linear gap cost model. This tag can be used for all standard DP algorithms. -
struct MyersBitVector_;, typedef Tag<MyersBitVector_> MyersBitVector;
Tag for selecting Myers' bit-vector algorithm. -
struct MyersHirschberg_;, typedef Tag<MyersHirschberg_> MyersHirschberg;
Tag for selecting a combination of Myers' bit-vector algorithm with Hirschberg's algorithm. -
struct Hirschberg_;, typedef Tag<Hirschberg_> NeedlemanWunsch;
Tag for selecting NeedlemanWunsch DP algorithm.