seqan/3-master-dev/alignment_2configuration_2all_8hpp_source.html

// SPDX-FileCopyrightText: 2006-2024 Knut Reinert & Freie Universität Berlin

// SPDX-FileCopyrightText: 2016-2024 Knut Reinert & MPI für molekulare Genetik

// SPDX-License-Identifier: BSD-3-Clause


#pragma once


#include <seqan3/alignment/configuration/align_config_band.hpp>

#include <seqan3/alignment/configuration/align_config_debug.hpp>

#include <seqan3/alignment/configuration/align_config_edit.hpp>

#include <seqan3/alignment/configuration/align_config_gap_cost_affine.hpp>

#include <seqan3/alignment/configuration/align_config_method.hpp>

#include <seqan3/alignment/configuration/align_config_min_score.hpp>

#include <seqan3/alignment/configuration/align_config_on_result.hpp>

#include <seqan3/alignment/configuration/align_config_output.hpp>

#include <seqan3/alignment/configuration/align_config_parallel.hpp>

#include <seqan3/alignment/configuration/align_config_result_type.hpp>

#include <seqan3/alignment/configuration/align_config_score_type.hpp>

#include <seqan3/alignment/configuration/align_config_scoring_scheme.hpp>

#include <seqan3/alignment/configuration/align_config_vectorised.hpp>

align_config_band.hpp
Provides seqan3::detail::align_config_band.

align_config_debug.hpp
Provides seqan3::align_cfg::detail::debug.

align_config_edit.hpp
Provides seqan3::align_cfg::edit_scheme.

align_config_gap_cost_affine.hpp
Provides seqan3::align_config::gap_cost_affine.

align_config_method.hpp
Provides global and local alignment configurations.

align_config_min_score.hpp
Provides seqan3::align_cfg::min_score configuration.

align_config_on_result.hpp
Provides seqan3::align_cfg::on_result.

align_config_output.hpp
Provides configuration for alignment output.

align_config_parallel.hpp
Provides seqan3::align_cfg::parallel configuration.

align_config_result_type.hpp
Provides seqan3::align_cfg::detail::result_type.

align_config_score_type.hpp
Provides alignment configuration seqan3::align_cfg::score_type.

align_config_scoring_scheme.hpp
Provides seqan3::align_cfg::scoring_scheme.

align_config_vectorised.hpp
Provides seqan3::align_cfg::vectorised configuration.