SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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seqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t > Member List

This is the complete list of members for seqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >, including all inherited members.

alignment_algorithm_tseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
alignment_matrix_policy()=defaultseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
alignment_matrix_policy(alignment_matrix_policy const &)=defaultseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
alignment_matrix_policy(alignment_matrix_policy &&)=defaultseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
alignment_matrix_policy(configuration_t const &)seqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >inlineprivate
allocate_matrix(sequence1_t &&sequence1, sequence2_t &&sequence2)seqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >inlineprivate
allocate_matrix(sequence1_t &&sequence1, sequence2_t &&sequence2, align_cfg::band_fixed_size const &band, alignment_algorithm_state< score_t > const &state)seqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >inlineprivate
current_alignment_column() noexceptseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >inlineprivate
initialise_matrix_iterator() noexceptseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >inlineprivate
next_alignment_column() noexceptseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >inlineprivate
operator=(alignment_matrix_policy const &)=defaultseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
operator=(alignment_matrix_policy &&)=defaultseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
score_matrixseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
score_matrix_iterseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
slice_sequences(sequence1_t &sequence1, sequence2_t &sequence2, align_cfg::band_fixed_size const &band) const noexceptseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >inlineprivate
trace_matrixseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
trace_matrix_iterseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
~alignment_matrix_policy()=defaultseqan3::detail::alignment_matrix_policy< alignment_algorithm_t, score_matrix_t, trace_matrix_t >private
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