after_column_iterator_increment(iter_t host_iter) noexcept | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | inlineprivate |
alignment_matrix_column_major_range_base()=default | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | private |
alignment_matrix_column_major_range_base(alignment_matrix_column_major_range_base const &)=default | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | private |
alignment_matrix_column_major_range_base(alignment_matrix_column_major_range_base &&)=default | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | private |
alignment_trace_matrix_full_banded()=default | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
alignment_trace_matrix_full_banded(alignment_trace_matrix_full_banded const &)=default | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
alignment_trace_matrix_full_banded(alignment_trace_matrix_full_banded &&)=default | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
alignment_trace_matrix_full_banded(first_sequence_t &&first, second_sequence_t &&second, align_cfg::band_fixed_size const &band, trace_t const initial_value=trace_t{}) | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | inline |
allocator_type typedef | seqan3::detail::alignment_trace_matrix_base< trace_t > | protected |
band_col_index | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
band_row_index | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
band_size | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
before_column_iterator_increment(iter_t host_iter) noexcept | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | inlineprivate |
begin() noexcept | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | inline |
begin() const noexcept=delete | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | |
cache_left | seqan3::detail::alignment_trace_matrix_base< trace_t > | protected |
cache_up | seqan3::detail::alignment_trace_matrix_base< trace_t > | protected |
column_data_view_type typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | protected |
coordinate_type typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | protected |
data | seqan3::detail::alignment_trace_matrix_base< trace_t > | protected |
derived_t | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | private |
element_type typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | protected |
end() noexcept | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | inline |
end() const noexcept=delete | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | |
initialise_column(size_type const column_index) noexcept | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | inlineprivate |
iterator typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
make_proxy(iter_t host_iter) noexcept | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | inlineprivate |
matrix_base_t typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | private |
num_cols | seqan3::detail::alignment_trace_matrix_base< trace_t > | protected |
num_rows | seqan3::detail::alignment_trace_matrix_base< trace_t > | protected |
on_column_iterator_creation(iter_t host_iter) noexcept | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | inlineprivate |
operator=(alignment_trace_matrix_full_banded const &)=default | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
operator=(alignment_trace_matrix_full_banded &&)=default | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
pool_type typedef | seqan3::detail::alignment_trace_matrix_base< trace_t > | protected |
range_base_t typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | private |
range_base_t | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | private |
reference typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
sentinel typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
size_type typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
trace_path(matrix_coordinate const &trace_begin) | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | inline |
value_type typedef | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |
~alignment_matrix_column_major_range_base()=default | seqan3::detail::alignment_matrix_column_major_range_base< derived_t > | private |
~alignment_trace_matrix_full_banded()=default | seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only > | |