acquire_matrices(size_t const sequence1_size, size_t const sequence2_size, score_type initial_score=score_type{}) const | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | inlineprotected |
check_valid_band_configuration(size_t const sequence1_size, size_t const sequence2_size) const | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | inlineprotected |
last_column_is_free | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
last_row_is_free | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
lower_diagonal | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
matrix_index_type typedef | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
operator=(policy_alignment_matrix const &)=default | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
operator=(policy_alignment_matrix &&)=default | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
policy_alignment_matrix()=default | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
policy_alignment_matrix(policy_alignment_matrix const &)=default | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
policy_alignment_matrix(policy_alignment_matrix &&)=default | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
policy_alignment_matrix(alignment_configuration_t const &config) | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | inlineprotected |
score_type typedef | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
upper_diagonal | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |
~policy_alignment_matrix()=default | seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t > | protected |