alphabet_ranks_type typedef | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | private |
initialise_from_scalar_scoring_scheme(scoring_scheme_t const &scoring_scheme) | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | inlineprivate |
make_score_profile(alphabet_ranks_t &&ranks) const noexcept | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | inline |
match_score | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | private |
mismatch_score | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | private |
operator=(simd_match_mismatch_scoring_scheme const &)=default | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | |
operator=(simd_match_mismatch_scoring_scheme &&)=default | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | |
operator=(scoring_scheme_t const &scoring_scheme) | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | inline |
padding_match_score() noexcept | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | inline |
padding_symbol | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | static |
scalar_type typedef | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | private |
score(alphabet_ranks_type const &ranks1, alphabet_ranks_type const &ranks2) const noexcept | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | inline |
simd_match_mismatch_scoring_scheme()=default | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | |
simd_match_mismatch_scoring_scheme(simd_match_mismatch_scoring_scheme const &)=default | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | |
simd_match_mismatch_scoring_scheme(simd_match_mismatch_scoring_scheme &&)=default | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | |
simd_match_mismatch_scoring_scheme(scoring_scheme_t const &scoring_scheme) | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | inlineexplicit |
~simd_match_mismatch_scoring_scheme()=default | seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t > | |