SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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minimiser.hpp File Reference

Provides seqan3::views::minimiser. More...

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Classes

class  seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
 Iterator for calculating minimisers. More...
 
struct  seqan3::detail::minimiser_fn
 seqan3::views::minimiser's range adaptor object type (non-closure). More...
 
class  seqan3::detail::minimiser_view< urng1_t, urng2_t >
 The type returned by seqan3::views::minimiser. More...
 

Namespaces

namespace  seqan3
 The main SeqAn3 namespace.
 
namespace  seqan3::detail
 The internal SeqAn3 namespace.
 
namespace  seqan3::views
 The SeqAn namespace for views.
 

Functions

template<std::ranges::viewable_range rng1_t, std::ranges::viewable_range rng2_t>
 seqan3::detail::minimiser_view (rng1_t &&, rng2_t &&, size_t const window_size) -> minimiser_view< std::views::all_t< rng1_t >, std::views::all_t< rng2_t > >
 A deduction guide for the view class template.
 
template<std::ranges::viewable_range rng1_t>
 seqan3::detail::minimiser_view (rng1_t &&, size_t const window_size) -> minimiser_view< std::views::all_t< rng1_t > >
 A deduction guide for the view class template.
 

Variables

constexpr auto seqan3::views::minimiser
 Computes minimisers for a range of comparable values. A minimiser is the smallest value in a window.
 

Detailed Description

Provides seqan3::views::minimiser.

Author
Mitra Darvish <mitra.darvish AT fu-berlin.de>
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