SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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seqan3::aminoacid_scoring_scheme< score_type > Member List

This is the complete list of members for seqan3::aminoacid_scoring_scheme< score_type >, including all inherited members.

alphabet_type typedefseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
aminoacid_scoring_scheme() noexcept=defaultseqan3::aminoacid_scoring_scheme< score_type >
aminoacid_scoring_scheme(match_score< score_arg_t > const ms, mismatch_score< score_arg_t > const mms)seqan3::aminoacid_scoring_scheme< score_type >inline
aminoacid_scoring_scheme(matrix_type const &matrix) noexceptseqan3::aminoacid_scoring_scheme< score_type >inline
aminoacid_scoring_scheme(aminoacid_similarity_matrix const matrix_id)seqan3::aminoacid_scoring_scheme< score_type >inline
aminoacid_scoring_scheme() -> aminoacid_scoring_scheme< int8_t >seqan3::aminoacid_scoring_scheme< score_type >related
aminoacid_scoring_scheme(match_score< score_arg_type >, mismatch_score< score_arg_type >) -> aminoacid_scoring_scheme< int8_t >seqan3::aminoacid_scoring_scheme< score_type >related
aminoacid_scoring_scheme(std::array< std::array< score_arg_type, 27 >, 27 >) -> aminoacid_scoring_scheme< score_arg_type >seqan3::aminoacid_scoring_scheme< score_type >related
aminoacid_scoring_scheme(aminoacid_similarity_matrix) -> aminoacid_scoring_scheme< int8_t >seqan3::aminoacid_scoring_scheme< score_type >related
matrix_sizeseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >static
matrix_size_type typedefseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
operator!=(derived_t const &rhs) const noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
operator=(scoring_scheme_base const &) noexcept=defaultseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
operator=(scoring_scheme_base &&) noexcept=defaultseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
operator==(derived_t const &rhs) const noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
score(alph1_t const alph1, alph2_t const alph2) noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
score(alph1_t const alph1, alph2_t const alph2) const noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
score_type typedefseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
scoring_scheme_base(scoring_scheme_base const &) noexcept=defaultseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
scoring_scheme_base(scoring_scheme_base &&) noexcept=defaultseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
scoring_scheme_base() noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
scoring_scheme_base(match_score< score_arg_t > const ms, mismatch_score< score_arg_t > const mms)seqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
scoring_scheme_base(matrix_type const &matrix) noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
set_custom_matrix(matrix_type const &matrix) noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
set_hamming_distance() noexceptseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
set_similarity_matrix(aminoacid_similarity_matrix const matrix_id)seqan3::aminoacid_scoring_scheme< score_type >inline
set_simple_scheme(match_score< score_arg_t > const ms, mismatch_score< score_arg_t > const mms)seqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >inline
~scoring_scheme_base() noexcept=defaultseqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
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