SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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search/fm_index/all.hpp
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1// SPDX-FileCopyrightText: 2006-2024 Knut Reinert & Freie Universität Berlin
2// SPDX-FileCopyrightText: 2016-2024 Knut Reinert & MPI für molekulare Genetik
3// SPDX-License-Identifier: BSD-3-Clause
4
43#pragma once
44
45#include <seqan3/search/fm_index/bi_fm_index.hpp>
46#include <seqan3/search/fm_index/bi_fm_index_cursor.hpp>
47#include <seqan3/search/fm_index/concept.hpp>
48#include <seqan3/search/fm_index/fm_index.hpp>
49#include <seqan3/search/fm_index/fm_index_cursor.hpp>
bi_fm_index.hpp
Provides the bidirectional seqan3::bi_fm_index.
bi_fm_index_cursor.hpp
Provides the seqan3::bi_fm_index_cursor for searching in the bidirectional seqan3::bi_fm_index.
fm_index.hpp
Provides the unidirectional seqan3::fm_index.
fm_index_cursor.hpp
Provides the seqan3::fm_index_cursor for searching in the unidirectional seqan3::fm_index.
concept.hpp
Provides the concept for seqan3::detail::sdsl_index.
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