SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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seqan3::sequence_file_input_options< sequence_legal_alphabet > Struct Template Reference

The options type defines various option members that influence the behaviour of all or some formats. More...

#include <seqan3/io/sequence_file/input_options.hpp>

+ Inheritance diagram for seqan3::sequence_file_input_options< sequence_legal_alphabet >:

Public Attributes

bool embl_genbank_complete_header = false
 Read the complete_header into the seqan3::field::id for embl or genbank format.
 
bool fasta_ignore_blanks_before_id = true
 Remove spaces after ">" (or ";") before the actual ID.
 
bool truncate_ids = false
 Read the ID string only up until the first whitespace character.
 

Detailed Description

template<typename sequence_legal_alphabet>
struct seqan3::sequence_file_input_options< sequence_legal_alphabet >

The options type defines various option members that influence the behaviour of all or some formats.

Template Parameters
sequence_legal_alphabet_The sequence legal alphabet exposed as type trait to the format.
Remarks
For a complete overview, take a look at Sequence File

The documentation for this struct was generated from the following file:
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