Provides files and formats for handling sequence data.
More...
|
struct | seqan3::format_embl |
| The EMBL format (tag). More...
|
|
struct | seqan3::format_fasta |
| The FastA format (tag). More...
|
|
struct | seqan3::format_fastq |
| The FastQ format. (tag) More...
|
|
struct | seqan3::format_genbank |
| The GenBank format (tag). More...
|
|
class | seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ > |
| A class for reading sequence files, e.g. FASTA, FASTQ ... More...
|
|
struct | seqan3::sequence_file_input_default_traits_aa |
| A traits type that specifies input as amino acids. More...
|
|
struct | seqan3::sequence_file_input_default_traits_dna |
| The default traits for seqan3::sequence_file_input. More...
|
|
class | seqan3::sequence_file_output< selected_field_ids_, valid_formats_, stream_char_type_ > |
| A class for writing sequence files, e.g. FASTA, FASTQ ... More...
|
|
interface | seqan3::SequenceFileInputFormat |
| The generic concept for sequence file in formats. More...
|
|
interface | seqan3::SequenceFileInputTraits |
| The requirements a traits_type for seqan3::sequence_file_input must meet. More...
|
|
interface | seqan3::SequenceFileOutputFormat |
| The generic concept for sequence file out formats. More...
|
|
struct | std::tuple_element< elem_no, seqan3::sequence_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > |
| Obtains the type of the specified element. More...
|
|
struct | std::tuple_size< seqan3::sequence_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > |
| Provides access to the number of elements in a tuple as a compile-time constant expression. More...
|
|
Provides files and formats for handling sequence data.
- See also
- IO
-
Sequence File Input and Output