SeqAn3  3.0.1
The Modern C++ library for sequence analysis.
output_options.hpp
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1 // -----------------------------------------------------------------------------------------------------
2 // Copyright (c) 2006-2020, Knut Reinert & Freie Universität Berlin
3 // Copyright (c) 2016-2020, Knut Reinert & MPI für molekulare Genetik
4 // This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5 // shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6 // -----------------------------------------------------------------------------------------------------
7 
13 #pragma once
14 
15 #include <seqan3/core/platform.hpp>
16 
17 namespace seqan3
18 {
19 
23 {
27  bool add_carriage_return = false;
28 
41  bool sam_require_header = true;
42 };
43 
44 } // namespace seqan3
seqan3::alignment_file_output_options
The options type defines various option members that influence the behavior of all or some formats.
Definition: output_options.hpp:22
seqan3::alignment_file_output_options::add_carriage_return
bool add_carriage_return
The default plain text line-ending is "\n", but on Windows an additional carriage return is recommend...
Definition: output_options.hpp:27
seqan3::alignment_file_output_options::sam_require_header
bool sam_require_header
Whether to require a header for SAM files.
Definition: output_options.hpp:41
seqan3
The main SeqAn3 namespace.
Definition: aligned_sequence_concept.hpp:36
platform.hpp
Provides platform and dependency checks.