SeqAn3  3.0.1
The Modern C++ library for sequence analysis.

alignment → matrix Relation

File in seqan3/alignmentIncludes file in seqan3/alignment/matrix
all.hppall.hpp
pairwise / detail / alignment_algorithm_state.hppalignment_coordinate.hpp
pairwise / detail / alignment_algorithm_state.hppalignment_optimum.hpp
pairwise / detail / type_traits.hpptrace_directions.hpp
matrix / alignment_coordinate.hppdetail / matrix_coordinate.hpp
matrix / alignment_optimum.hppdetail / matrix_coordinate.hpp
matrix / matrix_concept.hppdetail / matrix_coordinate.hpp
matrix / row_wise_matrix.hppdetail / two_dimensional_matrix.hpp
pairwise / align_result_selector.hppalignment_coordinate.hpp
pairwise / align_result_selector.hppdetail / two_dimensional_matrix.hpp
pairwise / align_result_selector.hpptrace_directions.hpp
pairwise / alignment_algorithm.hpptrace_directions.hpp
pairwise / alignment_algorithm.hppdetail / aligned_sequence_builder.hpp
pairwise / alignment_configurator.hppdetail / alignment_score_matrix_one_column.hpp
pairwise / alignment_configurator.hppdetail / alignment_score_matrix_one_column_banded.hpp
pairwise / alignment_configurator.hppdetail / alignment_trace_matrix_full.hpp
pairwise / alignment_configurator.hppdetail / alignment_trace_matrix_full_banded.hpp
pairwise / edit_distance_unbanded.hppalignment_coordinate.hpp
pairwise / edit_distance_unbanded.hppalignment_trace_algorithms.hpp
pairwise / edit_distance_unbanded.hppedit_distance_score_matrix_full.hpp
pairwise / edit_distance_unbanded.hppedit_distance_trace_matrix_full.hpp
pairwise / policy / affine_gap_init_policy.hpptrace_directions.hpp
pairwise / policy / affine_gap_policy.hpptrace_directions.hpp
pairwise / policy / find_optimum_policy.hppalignment_optimum.hpp
pairwise / policy / simd_affine_gap_policy.hppalignment_optimum.hpp
pairwise / policy / simd_affine_gap_policy.hpptrace_directions.hpp
pairwise / policy / simd_find_optimum_policy.hppalignment_optimum.hpp