SeqAn3  3.0.1
The Modern C++ library for sequence analysis.
Sequence File

Provides files and formats for handling sequence data. More...

+ Collaboration diagram for Sequence File:

Classes

class  seqan3::format_embl
 The EMBL format. More...
 
class  seqan3::format_fasta
 The FastA format. More...
 
class  seqan3::format_fastq
 The FastQ format. More...
 
class  seqan3::format_genbank
 The GenBank format. More...
 
class  seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_ >
 A class for reading sequence files, e.g. FASTA, FASTQ ... More...
 
struct  seqan3::sequence_file_input_default_traits_aa
 A traits type that specifies input as amino acids. More...
 
struct  seqan3::sequence_file_input_default_traits_dna
 The default traits for seqan3::sequence_file_input. More...
 
interface  sequence_file_input_format
 The generic concept for sequence file in formats. More...
 
interface  sequence_file_input_traits
 The requirements a traits_type for seqan3::sequence_file_input must meet. More...
 
class  seqan3::sequence_file_output< selected_field_ids_, valid_formats_ >
 A class for writing sequence files, e.g. FASTA, FASTQ ... More...
 
interface  sequence_file_output_format
 The generic concept for sequence file out formats. More...
 

Detailed Description

Provides files and formats for handling sequence data.

See also
IO
Sequence File Input and Output